CDS

Accession Number TCMCG010C32870
gbkey CDS
Protein Id XP_016544972.1
Location join(41176914..41176952,41177038..41177149,41177457..41177518,41246883..41247128,41247205..41248644,41248732..41249145)
Gene LOC107845265
GeneID 107845265
Organism Capsicum annuum

Protein

Length 770aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016689486.1
Definition PREDICTED: protein LHY isoform X3 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category K
Description SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K12133        [VIEW IN KEGG]
ko:K12134        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009739        [VIEW IN EMBL-EBI]
GO:0009751        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042754        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043393        [VIEW IN EMBL-EBI]
GO:0043433        [VIEW IN EMBL-EBI]
GO:0043496        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048571        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048574        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051090        [VIEW IN EMBL-EBI]
GO:0051098        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACCCTTATTCCTCTGGGGAGGAAATTGTCGTTAAGACAAGGAAACCTTATACCATCACTAAGCAACGTGAGCGATGGACGGAGGAGGAGCACAATAGGTTCCTAGAAGCTTTGAAACTCTATGGGCGTGCTTGGCAGCGCATAGAAGAACACATAGGAACAAAAACTGCTGTGCAGATCAGAAGTCATGCGCAAAAGTTTTTTACAAAGTTTCCTAATCTGGTCCAGTTAGAGAAGGAGGCTCTTACAAAGGGAGTCCCAATAAGTGAAGCACTCGACATTGAAATTCCTCCTCCACGACCTAAAAGGAAACCAAGTAATCCTTATCCTCGTAAGACGAGCATAGCAGTTCCCTCATCACAGGTAGGAACAAGAGATGGGAAACTATCGACATCTTTTTCTTCCATCTGTGAGGATAGGAACTTATTTGACCTGGAGAAGGAACCGATCACTGAGAAACCTGGCGGAAACGAGAAGCTGGGCAATGTGCAAGAAAACCAGAACAAGAAAACTTGCTCTCAAGGGTTCACTCTTTTCAAGGAAGGTGCTTCTGCAGCCTCTATGTTGTCAGGAAAGTCCTTGCAAACACCTGTGGCACCTACAGATTCATGCGCTTTTAGCGAGTCTGCGCCTGTCACGAAAGGAGTGGTAAACCATGATATAGCAAATAAATCTTTTCTCACTGTTGAATCCAAAGAGCATCAACAGTCGGATATACTCGATGTCAAAGAGTCATTTCAAGGTAACAGCTCATGTAAAACCTTCAATGGGGGGAAATCTTGCCAGTTGAGTGAGAAGTTGGCACAATGTGAGGAAAACCATCCAACGAGTCAGCCAGATCATTTTGGGGAATTCTCAAGAAATGATATGCAAGTGACACAGAACTATCCAAGACATGTGCCAGTGCATATTCTTGATGGAACAAATGGTTCTCAAACAGTCCCAGATATTTTTAATCACGAATCTACGAGCCAGCAGATAGGTGGGGTCCCGGGGCTCCCAAATTTGTATTGTAACCCTGCTTCCTCTGCCACATCTGAGCACCATAGCAATGCTCCACAGTCATCCATTCATCAGTCATTTTCTTGTTTCCATCCCATCTTCACCCCTATTCGTGATCCAGATGATTATCGATCGTTTCTGCAATTATCCTCCACTTTCTCCAGCCTTATTGTTTCTGCTTTATTGCAAAATCCAGCAGCACATGCTGCAGCAAGTTTTGCTGCTAGCTTTTGGCCGTATGCAAATATGGAAACTCCAACGGATTCTCCAACAGGTAACACCGCAAGCCAGATTAACTCAGCTCCTAGTATGGCAGCAATTGCTGCTGCTACAGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGACTCCTACCAGTGTGCTCTCAATTTCAAAGCAGCTTTACCTGTGTTCCTACATCAGCAACATCAATGCAAGTGGATGCCTGTCAACCTAGAGTAGGCAAGAATGAGGGAATAGAAGGAATTCATAATTCTCCCCATGCTCAGCAACCCATCCCAGACTGCTCTGAAGCTTTGCAAGAACAACAATCAGCTTCTAAGTTGCCAGCGTCACCATCATCAGAGTCGGAGGAGAGTGAAGATAGAAAGCTAAAAACTGGGTTAACAGCTACTGATACTGAGCAAGGAGCGGCAGCCGCTGAAATTAATGAGCCAAACACAGAGAAGGGCAGGAAACAGGTAGATCGTTCTTCCTGTGGATCCAACACCCCTTCAAGTAGTGAAATTGAGACAGATGCTTTGGAGAAGGATGAGAAAGATAAAGAAGAGCCTCAAGAATCTAATACTATCCTTATAACCGGTGAAGCTGTGAATCGGCGTGGTAGAAATTTCATCAGTCCAACTGAATCTTGGAAAGAAGTCTCTGAAGAGGGGCGGATAGCTTTCCAGGCTCTTTTCACCAGAGAAGTGTTGCCTCAAAGTTTTTCTCCTTCACTTGAACTGAAAAATAAGGGAAAGATCATTCTTGAAAAGTTAAAGCAAAAGCCAGATGAGAAAGTGCAATGTGGATCGCAGTTAGACCTTAATGATCAGGCATCCAATAACTTTTTCAGTCACCAAACAATGTCAGACTACGTGTTCTTAACTGGCAACAAAGAAGATGTTGAAAAATGCCTACCGGTGATGGAACTTGGACAAGTAAGGTTGAAAGCTCGCCGTAATGGATTTAAACCTTACAAGAGGTGCTCATTGGAGGCAAATGATGGCAGGATGACAAGTGCAAGCTGTCAGGATGAAGAGAAAGGCTCGAAAAGACTTCGGTTGGAAGGAGAAGCTTCTACGTAG
Protein:  
MDPYSSGEEIVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKFPNLVQLEKEALTKGVPISEALDIEIPPPRPKRKPSNPYPRKTSIAVPSSQVGTRDGKLSTSFSSICEDRNLFDLEKEPITEKPGGNEKLGNVQENQNKKTCSQGFTLFKEGASAASMLSGKSLQTPVAPTDSCAFSESAPVTKGVVNHDIANKSFLTVESKEHQQSDILDVKESFQGNSSCKTFNGGKSCQLSEKLAQCEENHPTSQPDHFGEFSRNDMQVTQNYPRHVPVHILDGTNGSQTVPDIFNHESTSQQIGGVPGLPNLYCNPASSATSEHHSNAPQSSIHQSFSCFHPIFTPIRDPDDYRSFLQLSSTFSSLIVSALLQNPAAHAAASFAASFWPYANMETPTDSPTGNTASQINSAPSMAAIAAATVAAATAWWAAHGLLPVCSQFQSSFTCVPTSATSMQVDACQPRVGKNEGIEGIHNSPHAQQPIPDCSEALQEQQSASKLPASPSSESEESEDRKLKTGLTATDTEQGAAAAEINEPNTEKGRKQVDRSSCGSNTPSSSEIETDALEKDEKDKEEPQESNTILITGEAVNRRGRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPSLELKNKGKIILEKLKQKPDEKVQCGSQLDLNDQASNNFFSHQTMSDYVFLTGNKEDVEKCLPVMELGQVRLKARRNGFKPYKRCSLEANDGRMTSASCQDEEKGSKRLRLEGEAST